Flexible Mixture Modeling

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Documentation for package ‘flexmix’ version 2.2-4

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A B C D E F G I K L M N P R S T U W

-- A --

AIC,flexmix-method Methods for Function AIC
AIC,stepFlexmix-method Methods for Function AIC

-- B --

betablocker Clinical trial of beta-blockers
BIC,flexmix-method Methods for Function BIC
BIC,stepFlexmix-method Methods for Function BIC
bioChemists Article production by graduate students in biochemistry Ph.D. programs
BregFix Artificial Example for Binomial Regression

-- C --

candy Candy packs purchased
clusters,flexmix,missing-method Determine cluster membership and posterior probabilities
clusters,FLXdist,ANY-method Determine cluster membership and posterior probabilities
coerce,list,FLXcontrol-method Class "FLXcontrol"
coerce,list,FLXnested-method Class "FLXnested"
coerce,NULL,FLXcontrol-method Class "FLXcontrol"
coerce,NULL,FLXnested-method Class "FLXnested"
coerce,numeric,FLXnested-method Class "FLXnested"

-- D --

dmft Dental data

-- E --

EIC Entropic measure information criterion
EIC,flexmix-method Entropic measure information criterion
EIC,stepFlexmix-method Entropic measure information criterion
ExLinear Artificial Data from a Generalized Linear Regression Mixture
ExNclus Artificial Example with 4 Gaussians
ExNPreg Artificial Example for Normal, Poisson and Binomial Regression

-- F --

fabricfault Fabric Faults
fitted,flexmix-method Extract Model Fitted Values
fitted,FLXM-method Extract Model Fitted Values
fitted,FLXR-method Extract Model Fitted Values
fitted,FLXRMRglm-method Extract Model Fitted Values
flexmix Flexible Mixture Modeling
flexmix,formula,ANY,ANY,ANY,FLXM-method Flexible Mixture Modeling
flexmix,formula,ANY,ANY,ANY,list-method Flexible Mixture Modeling
flexmix,formula,ANY,ANY,ANY,missing-method Flexible Mixture Modeling
flexmix-class Class "flexmix"
FLXbclust FlexMix Binary Clustering Driver
FLXcomponent-class Class "FLXcomponent"
FLXconstant Creates the concomitant variable model.
FLXcontrol-class Class "FLXcontrol"
FLXdeterminePostunscaled,FLXMRlmer-method FlexMix Interface to Linear Mixed Models
FLXdeterminePostunscaled,FLXMRlmm-method FlexMix Interface to Linear Mixed Models
FLXdist Finite mixtures of distributions
FLXdist-class Class "FLXdist"
FLXfit Fitter Function for FlexMix Models
FLXfit,list-method Fitter Function for FlexMix Models
FLXgetDesign,FLXMRziglm-method FlexMix Interface to Zero Inflated Generalized Linear Models
FLXgetModelmatrix,FLXMRlmer-method FlexMix Interface to Linear Mixed Models
FLXgetModelmatrix,FLXMRlmm-method FlexMix Interface to Linear Mixed Models
FLXgetObs,FLXMRlmm-method FlexMix Interface to Linear Mixed Models
FLXglm FlexMix Interface to Generalized Linear Models
FLXglmFix FlexMix Interface to Generalized Linear Models with fixed coefficients
FLXgradlogLikfun,FLXMRziglm-method FlexMix Interface to Zero Inflated Generalized Linear Models
FLXM-class Class "FLXM"
FLXMC-class Class "FLXM"
FLXmclust FlexMix Clustering Demo Driver
FLXMCmvbinary FlexMix Binary Clustering Driver
FLXMCmvcombi FlexMix Binary and Gaussian Clustering Driver
FLXMCmvnorm FlexMix Clustering Demo Driver
FLXMCmvpois FlexMix Poisson Clustering Driver
FLXMR-class Class "FLXM"
FLXMRglm FlexMix Interface to Generalized Linear Models
FLXMRglmfix FlexMix Interface to Generalized Linear Models with fixed coefficients
FLXMRlmer FlexMix Interface to Linear Mixed Models
FLXMRlmer-class FlexMix Interface to Linear Mixed Models
FLXMRlmm FlexMix Interface to Linear Mixed Models
FLXMRlmm-class FlexMix Interface to Linear Mixed Models
FLXMRlmmfix-class FlexMix Interface to Linear Mixed Models
FLXMRrobglm FlexMix Driver for Robust Estimation of Generalized Linear Models
FLXMRrobglm-class FlexMix Driver for Robust Estimation of Generalized Linear Models
FLXMRziglm FlexMix Interface to Zero Inflated Generalized Linear Models
FLXMRziglm-class FlexMix Interface to Zero Inflated Generalized Linear Models
FLXmstep,FLXMRlmer-method FlexMix Interface to Linear Mixed Models
FLXmstep,FLXMRlmm-method FlexMix Interface to Linear Mixed Models
FLXmstep,FLXMRlmmfix-method FlexMix Interface to Linear Mixed Models
FLXmultinom Creates the concomitant variable model.
FLXnested-class Class "FLXnested"
FLXP-class Class "FLXP"
FLXPconstant Creates the concomitant variable model.
FLXPconstant-class Class "FLXP"
FLXPmultinom Creates the concomitant variable model.
FLXPmultinom-class Class "FLXP"
FLXreplaceParameters,FLXMRziglm-method FlexMix Interface to Zero Inflated Generalized Linear Models
FLXRmstep-class Refit a Fitted Model
FLXRoptim-class Refit a Fitted Model

-- G --

getModel,stepFlexmix-method Run FlexMix Repeatedly
group Extract grouping variable
group,flexmix-method Extract grouping variable
group,FLXM-method Extract grouping variable
group,FLXMRglmfix-method Extract grouping variable
group-methods Extract grouping variable

-- I --

ICL,flexmix-method Integrated completed likelihood criterion
ICL,stepFlexmix-method Integrated completed likelihood criterion
initialize,FLXnested-method Class "FLXnested"
initialize,FLXP-method Class "FLXP"

-- K --

KLdiv,flexmix-method Kullback-Leibler Divergence
KLdiv,FLXMC-method Kullback-Leibler Divergence
KLdiv,FLXMRglm-method Kullback-Leibler Divergence
KLdiv,matrix-method Kullback-Leibler Divergence

-- L --

Lapply,FLXRmstep-method Methods for Function Lapply
logLik,flexmix-method Methods for Function logLik in Package 'flexmix'

-- M --

Mehta Mehta Trial

-- N --

Nclus Artificial Example with 4 Gaussians
NPreg Artificial Example for Normal, Poisson and Binomial Regression
NregFix Artificial Example for Normal Regression

-- P --

parameters,FLXdist-method Class "FLXdist"
patent Patents and R&D spending
plot,flexmix,missing-method Rootogram of Posterior Probabilities
plot,FLXRoptim,missing-method Refit a Fitted Model
plot,stepFlexmix,missing-method Run FlexMix Repeatedly
plot-methods Rootogram of Posterior Probabilities
plotEll Plot Confidence Ellipses for FLXMCmvnorm Results
posterior,flexmix,missing-method Determine cluster membership and posterior probabilities
posterior,FLXdist,listOrdata.frame-method Determine cluster membership and posterior probabilities
predict,FLXdist-method Class "FLXdist"
predict,FLXM-method Class "FLXdist"
predict,FLXMRglm-method Class "FLXdist"
predict,FLXMRlmm-method FlexMix Interface to Linear Mixed Models
prior Class "FLXdist"
prior,FLXdist-method Class "FLXdist"

-- R --

refit,flexmix-method Refit a Fitted Model
refit,FLXMRziglm-method FlexMix Interface to Zero Inflated Generalized Linear Models
relabel Relabel the Components
relabel,flexmix,character-method Relabel the Components
rflexmix Random number generator for finite mixtures
rflexmix,flexmix,missing-method Random number generator for finite mixtures
rflexmix,FLXdist,listOrdata.frame-method Random number generator for finite mixtures
rflexmix,FLXdist,numeric-method Random number generator for finite mixtures
rFLXM Random number generator for finite mixtures
rFLXM,FLXM,FLXcomponent-method Random number generator for finite mixtures
rFLXM,FLXM,list-method Random number generator for finite mixtures
rFLXM,FLXMC,FLXcomponent-method Random number generator for finite mixtures
rFLXM,FLXMCbinom,FLXcomponent-method Random number generator for finite mixtures
rFLXM,FLXMCmultinom,FLXcomponent-method Random number generator for finite mixtures
rFLXM,FLXMRglm,FLXcomponent-method Random number generator for finite mixtures
rFLXM,FLXMRglm,list-method Random number generator for finite mixtures
rFLXM,FLXMRglmfix,list-method Random number generator for finite mixtures

-- S --

salmonellaTA98 Salmonella reverse mutagenicity assay
seizure Epileptic Seizure Data
show,Coefmat-method Refit a Fitted Model
show,flexmix-method Flexible Mixture Modeling
show,FLXcomponent-method Class "FLXcomponent"
show,FLXdist-method Finite mixtures of distributions
show,FLXM-method Class "FLXM"
show,FLXP-method Creates the concomitant variable model.
show,FLXR-method Refit a Fitted Model
show,stepFlexmix-method Run FlexMix Repeatedly
show,summary.flexmix-method Flexible Mixture Modeling
simulate,FLXdist-method Finite mixtures of distributions
stepFlexmix Run FlexMix Repeatedly
stepFlexmix-class Run FlexMix Repeatedly
summary,flexmix-method Flexible Mixture Modeling
summary,FLXRmstep-method Refit a Fitted Model
summary,FLXRoptim-method Refit a Fitted Model

-- T --

tribolium Tribolium beetles
trypanosome Trypanosome

-- U --

unique,stepFlexmix-method Run FlexMix Repeatedly

-- W --

whiskey Survey Data on Brands of Scotch whiskey Consumed
whiskey_brands Survey Data on Brands of Scotch whiskey Consumed