Kernel-based Machine Learning Lab


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Documentation for package ‘kernlab’ version 0.9-9

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A B C D E F G H I K L M N O P Q R S T V W X Y

-- A --

alpha Class "vm"
alpha,gausspr-method Class "gausspr"
alpha,kfa-method Class "kfa"
alpha,kqr-method Class "kqr"
alpha,ksvm-method Class "ksvm"
alpha,lssvm-method Class "lssvm"
alpha,onlearn-method Class "onlearn"
alpha,rvm-method Class "rvm"
alpha,vm-method Class "vm"
alphaindex Class "ksvm"
alphaindex,gausspr-method Class "gausspr"
alphaindex,kfa-method Class "kfa"
alphaindex,kqr-method Class "kqr"
alphaindex,ksvm-method Class "ksvm"
alphaindex,lssvm-method Class "lssvm"
anovadot Kernel Functions
anovakernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
as.kernelMatrix Assing kernelMatrix class to matrix objects
as.kernelMatrix,matrix-method Assing kernelMatrix class to matrix objects
as.kernelMatrix-methods Assing kernelMatrix class to matrix objects
Asymbound Kernel Maximum Mean Discrepancy.
Asymbound,kmmd-method Class "kqr"
AsympH0 Kernel Maximum Mean Discrepancy.
AsympH0,kmmd-method Class "kqr"

-- B --

b Class "ksvm"
b,kqr-method Class "kqr"
b,ksvm-method Class "ksvm"
b,lssvm-method Class "lssvm"
b,onlearn-method Class "onlearn"
besseldot Kernel Functions
besselkernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
buffer Class "onlearn"
buffer,onlearn-method Class "onlearn"

-- C --

centers Class "specc"
centers,specc-method Class "specc"
coef,gausspr-method Gaussian processes for regression and classification
coef,kfa-method Kernel Feature Analysis
coef,kqr-method Kernel Quantile Regression.
coef,ksvm-method Support Vector Machines
coef,lssvm-method Least Squares Support Vector Machine
coef,rvm-method Relevance Vector Machine
coef,vm-method Class "ksvm"
convergence Class "ranking"
convergence,ranking-method Class "ranking"
couple Probabilities Coupling function
cross Class "vm"
cross,gausspr-method Class "gausspr"
cross,kqr-method Class "kqr"
cross,ksvm-method Class "ksvm"
cross,lssvm-method Class "lssvm"
cross,rvm-method Class "rvm"
cross,vm-method Class "vm"
csi Cholesky decomposition with Side Information
csi,matrix-method Cholesky decomposition with Side Information
csi-class Class "csi"
csi-methods Cholesky decomposition with Side Information

-- D --

diagresidues Class "inchol"
diagresidues,csi-method Class "csi"
diagresidues,inchol-method Class "inchol"
dots Kernel Functions
dual Class "ipop"
dual,ipop-method Class "ipop"

-- E --

edgegraph Class "ranking"
edgegraph,ranking-method Class "ranking"
eig Class "prc"
eig,kha-method Class "kha"
eig,kpca-method Class "kpca"
eig,prc-method Class "prc"
error Class "vm"
error,gausspr-method Class "gausspr"
error,kqr-method Class "kqr"
error,ksvm-method Class "ksvm"
error,lssvm-method Class "lssvm"
error,rvm-method Class "rvm"
error,vm-method Class "vm"
eskm,kha-method Class "kha"

-- F --

fit,onlearn-method Class "onlearn"
fitted,ksvm-method Class "ksvm"
fitted,vm-method Class "vm"
fourierdot Kernel Functions
fourierkernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"

-- G --

gausspr Gaussian processes for regression and classification
gausspr,formula-method Gaussian processes for regression and classification
gausspr,matrix-method Gaussian processes for regression and classification
gausspr,vector-method Gaussian processes for regression and classification
gausspr-class Class "gausspr"

-- H --

H0 Kernel Maximum Mean Discrepancy.
H0,kmmd-method Class "kqr"
how Class "ipop"
how,ipop-method Class "ipop"

-- I --

inchol Incomplete Cholesky decomposition
inchol,matrix-method Incomplete Cholesky decomposition
inchol-class Class "inchol"
income Income Data
inlearn Onlearn object initialization
inlearn,numeric-method Onlearn object initialization
ipop Quadratic Programming Solver
ipop,ANY,matrix-method Quadratic Programming Solver
ipop-class Class "ipop"

-- K --

kcall Class "vm"
kcall,gausspr-method Class "gausspr"
kcall,kfa-method Class "kfa"
kcall,kha-method Class "kha"
kcall,kpca-method Class "kpca"
kcall,kqr-method Class "kqr"
kcall,ksvm-method Class "ksvm"
kcall,lssvm-method Class "lssvm"
kcall,prc-method Class "prc"
kcall,rvm-method Class "rvm"
kcall,vm-method Class "vm"
kcca Kernel Canonical Correlation Analysis
kcca,matrix-method Kernel Canonical Correlation Analysis
kcca-class Class "kcca"
kcor Class "kcca"
kcor,kcca-method Class "kcca"
kernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
kernelf Class "vm"
kernelf,gausspr-method Class "gausspr"
kernelf,kfa-method Class "kfa"
kernelf,kha-method Class "kha"
kernelf,kmmd-method Class "kqr"
kernelf,kpca-method Class "kpca"
kernelf,kqr-method Class "kqr"
kernelf,ksvm-method Class "ksvm"
kernelf,lssvm-method Class "lssvm"
kernelf,onlearn-method Class "onlearn"
kernelf,prc-method Class "prc"
kernelf,rvm-method Class "rvm"
kernelf,specc-method Class "specc"
kernelf,vm-method Class "vm"
kernelFast Kernel Matrix functions
kernelFast,anovakernel-method Kernel Matrix functions
kernelFast,besselkernel-method Kernel Matrix functions
kernelFast,kernel-method Kernel Matrix functions
kernelFast,laplacekernel-method Kernel Matrix functions
kernelFast,polykernel-method Kernel Matrix functions
kernelFast,rbfkernel-method Kernel Matrix functions
kernelFast,splinekernel-method Kernel Matrix functions
kernelFast,stringkernel-method Kernel Matrix functions
kernelFast,tanhkernel-method Kernel Matrix functions
kernelFast,vanillakernel-method Kernel Matrix functions
kernelMatrix Kernel Matrix functions
kernelMatrix,anovakernel-method Kernel Matrix functions
kernelMatrix,besselkernel-method Kernel Matrix functions
kernelMatrix,kernel-method Kernel Matrix functions
kernelMatrix,laplacekernel-method Kernel Matrix functions
kernelMatrix,polykernel-method Kernel Matrix functions
kernelMatrix,rbfkernel-method Kernel Matrix functions
kernelMatrix,splinekernel-method Kernel Matrix functions
kernelMatrix,stringkernel-method Kernel Matrix functions
kernelMatrix,tanhkernel-method Kernel Matrix functions
kernelMatrix,vanillakernel-method Kernel Matrix functions
kernelMatrix-class Assing kernelMatrix class to matrix objects
kernelMult Kernel Matrix functions
kernelMult,anovakernel,ANY-method Kernel Matrix functions
kernelMult,besselkernel,ANY-method Kernel Matrix functions
kernelMult,character,kernelMatrix-method Kernel Matrix functions
kernelMult,kernel-method Kernel Matrix functions
kernelMult,laplacekernel,ANY-method Kernel Matrix functions
kernelMult,polykernel,ANY-method Kernel Matrix functions
kernelMult,rbfkernel,ANY-method Kernel Matrix functions
kernelMult,splinekernel,ANY-method Kernel Matrix functions
kernelMult,stringkernel,ANY-method Kernel Matrix functions
kernelMult,tanhkernel,ANY-method Kernel Matrix functions
kernelMult,vanillakernel,ANY-method Kernel Matrix functions
kernelPol Kernel Matrix functions
kernelPol,anovakernel-method Kernel Matrix functions
kernelPol,besselkernel-method Kernel Matrix functions
kernelPol,kernel-method Kernel Matrix functions
kernelPol,laplacekernel-method Kernel Matrix functions
kernelPol,polykernel-method Kernel Matrix functions
kernelPol,rbfkernel-method Kernel Matrix functions
kernelPol,splinekernel-method Kernel Matrix functions
kernelPol,stringkernel-method Kernel Matrix functions
kernelPol,tanhkernel-method Kernel Matrix functions
kernelPol,vanillakernel-method Kernel Matrix functions
kernels Kernel Functions
kfa Kernel Feature Analysis
kfa,formula-method Kernel Feature Analysis
kfa,matrix-method Kernel Feature Analysis
kfa-class Class "kfa"
kfunction Kernel Functions
kfunction-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
kha Kernel Principal Components Analysis
kha,formula-method Kernel Principal Components Analysis
kha,matrix-method Kernel Principal Components Analysis
kha-class Class "kha"
kkmeans Kernel k-means
kkmeans,formula-method Kernel k-means
kkmeans,kernelMatrix-method Kernel k-means
kkmeans,list-method Kernel k-means
kkmeans,matrix-method Kernel k-means
kmmd Kernel Maximum Mean Discrepancy.
kmmd,kernelMatrix-method Kernel Maximum Mean Discrepancy.
kmmd,list-method Kernel Maximum Mean Discrepancy.
kmmd,matrix-method Kernel Maximum Mean Discrepancy.
kmmd-class Class "kqr"
kpar Kernel Functions
kpar,gausspr-method Class "gausspr"
kpar,kernel-method Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
kpar,kqr-method Class "kqr"
kpar,ksvm-method Class "ksvm"
kpar,lssvm-method Class "lssvm"
kpar,onlearn-method Class "onlearn"
kpar,rvm-method Class "rvm"
kpar,vm-method Class "vm"
kpca Kernel Principal Components Analysis
kpca,formula-method Kernel Principal Components Analysis
kpca,kernelMatrix-method Kernel Principal Components Analysis
kpca,list-method Kernel Principal Components Analysis
kpca,matrix-method Kernel Principal Components Analysis
kpca-class Class "kpca"
kqr Kernel Quantile Regression.
kqr,formula-method Kernel Quantile Regression.
kqr,kernelMatrix-method Kernel Quantile Regression.
kqr,list-method Kernel Quantile Regression.
kqr,matrix-method Kernel Quantile Regression.
kqr,vector-method Kernel Quantile Regression.
kqr-class Class "kqr"
ksvm Support Vector Machines
ksvm,formula-method Support Vector Machines
ksvm,kernelMatrix-method Support Vector Machines
ksvm,list-method Support Vector Machines
ksvm,matrix-method Support Vector Machines
ksvm,vector-method Support Vector Machines
ksvm-class Class "ksvm"

-- L --

laplacedot Kernel Functions
laplacekernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
lev Class "vm"
lev,gausspr-method Class "gausspr"
lev,ksvm-method Class "ksvm"
lev,lssvm-method Class "lssvm"
lev,rvm-method Class "rvm"
lev,vm-method Class "vm"
lssvm Least Squares Support Vector Machine
lssvm,formula-method Least Squares Support Vector Machine
lssvm,kernelMatrix-method Least Squares Support Vector Machine
lssvm,list-method Least Squares Support Vector Machine
lssvm,matrix-method Least Squares Support Vector Machine
lssvm,vector-method Least Squares Support Vector Machine
lssvm-class Class "lssvm"
lssvm-methods Least Squares Support Vector Machine

-- M --

maxresiduals Class "inchol"
maxresiduals,csi-method Class "csi"
maxresiduals,inchol-method Class "inchol"
mlike Class "rvm"
mlike,rvm-method Class "rvm"
mmdstats Kernel Maximum Mean Discrepancy.
mmdstats,kmmd-method Class "kqr"
musk Musk data set

-- N --

nSV Class "ksvm"
nSV,ksvm-method Class "ksvm"
nSV,lssvm-method Class "lssvm"
nvar Class "rvm"
nvar,rvm-method Class "rvm"

-- O --

obj Class "ksvm"
obj,ksvm-method Class "ksvm"
onlearn Kernel Online Learning algorithms
onlearn,onlearn-method Kernel Online Learning algorithms
onlearn-class Class "onlearn"

-- P --

param Class "ksvm"
param,kqr-method Class "kqr"
param,ksvm-method Class "ksvm"
param,lssvm-method Class "lssvm"
pcv Class "prc"
pcv,kha-method Class "kha"
pcv,kpca-method Class "kpca"
pcv,prc-method Class "prc"
pivots Class "inchol"
pivots,csi-method Class "csi"
pivots,inchol-method Class "inchol"
plot,ksvm,missing-method plot method for support vector object
plot,ksvm-method plot method for support vector object
plot.ksvm plot method for support vector object
polydot Kernel Functions
polykernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
prc-class Class "prc"
predgain Class "csi"
predgain,csi-method Class "csi"
predict,gausspr-method predict method for Gaussian Processes object
predict,kfa-method Class "kfa"
predict,kha-method Kernel Principal Components Analysis
predict,kpca-method Kernel Principal Components Analysis
predict,kqr-method Predict method for kernel Quantile Regression object
predict,ksvm-method predict method for support vector object
predict,lssvm-method Least Squares Support Vector Machine
predict,onlearn-method Class "onlearn"
predict,rvm-method Relevance Vector Machine
predict.gausspr predict method for Gaussian Processes object
predict.kqr Predict method for kernel Quantile Regression object
predict.ksvm predict method for support vector object
primal Class "ipop"
primal,ipop-method Class "ipop"
prior Class "ksvm"
prior,ksvm-method Class "ksvm"
prob.model Class "ksvm"
prob.model,ksvm-method Class "ksvm"
promotergene E. coli promoter gene sequences (DNA)

-- Q --

Q Class "csi"
Q,csi-method Class "csi"

-- R --

R Class "csi"
R,csi-method Class "csi"
Radbound Kernel Maximum Mean Discrepancy.
Radbound,kmmd-method Class "kqr"
ranking Ranking
ranking,kernelMatrix-method Ranking
ranking,list-method Ranking
ranking,matrix-method Ranking
ranking-class Class "ranking"
rbfdot Kernel Functions
rbfkernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
reuters Reuters Text Data
rho Class "onlearn"
rho,onlearn-method Class "onlearn"
rlabels Reuters Text Data
rotated Class "kpca"
rotated,kpca-method Class "kpca"
RVindex Class "rvm"
RVindex,rvm-method Class "rvm"
rvm Relevance Vector Machine
rvm,formula-method Relevance Vector Machine
rvm,kernelMatrix-method Relevance Vector Machine
rvm,list-method Relevance Vector Machine
rvm,matrix-method Relevance Vector Machine
rvm,vector-method Relevance Vector Machine
rvm-class Class "rvm"
rvm-methods Relevance Vector Machine

-- S --

scaling Class "ksvm"
scaling,gausspr-method Class "gausspr"
scaling,kqr-method Class "kqr"
scaling,ksvm-method Class "ksvm"
scaling,lssvm-method Class "lssvm"
show Class "ksvm"
show,gausspr-method Gaussian processes for regression and classification
show,kernel-method Kernel Functions
show,kfa-method Kernel Feature Analysis
show,kmmd-method Kernel Maximum Mean Discrepancy.
show,kqr-method Kernel Quantile Regression.
show,ksvm-method Support Vector Machines
show,lssvm-method Least Squares Support Vector Machine
show,onlearn-method Class "onlearn"
show,ranking-method Class "ranking"
show,rvm-method Relevance Vector Machine
show,specc-method Spectral Clustering
sigest Hyperparameter estimation for the Gaussian Radial Basis kernel
sigest,formula-method Hyperparameter estimation for the Gaussian Radial Basis kernel
sigest,matrix-method Hyperparameter estimation for the Gaussian Radial Basis kernel
size Class "specc"
size,specc-method Class "specc"
spam Spam E-mail Database
specc Spectral Clustering
specc,formula-method Spectral Clustering
specc,kernelMatrix-method Spectral Clustering
specc,list-method Spectral Clustering
specc,matrix-method Spectral Clustering
specc-class Class "specc"
spirals Spirals Dataset
splinedot Kernel Functions
splinekernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
stringdot String Kernel Functions
stringkernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
SVindex Class "ksvm"
SVindex,ksvm-method Class "ksvm"

-- T --

tanhdot Kernel Functions
tanhkernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
ticdata The Insurance Company Data
truegain Class "csi"
truegain,csi-method Class "csi"
type Class "vm"
type,gausspr-method Class "gausspr"
type,ksvm-method Class "ksvm"
type,lssvm-method Class "lssvm"
type,onlearn-method Class "onlearn"
type,rvm-method Class "rvm"
type,vm-method Class "vm"

-- V --

vanilladot Kernel Functions
vanillakernel-class Class "kernel" "rbfkernel" "polykernel", "tanhkernel", "vanillakernel"
vm-class Class "vm"

-- W --

withinss Class "specc"
withinss,specc-method Class "specc"

-- X --

xcoef Class "kcca"
xcoef,kcca-method Class "kcca"
xmatrix Class "vm"
xmatrix,gausspr-method Class "gausspr"
xmatrix,kfa-method Class "kfa"
xmatrix,kha-method Class "kha"
xmatrix,kpca-method Class "kpca"
xmatrix,kqr-method Class "kqr"
xmatrix,ksvm-method Class "ksvm"
xmatrix,lssvm-method Class "lssvm"
xmatrix,onlearn-method Class "onlearn"
xmatrix,prc-method Class "prc"
xmatrix,rvm-method Class "rvm"
xmatrix,vm-method Class "vm"
xvar,kcca-method Class "kcca"

-- Y --

ycoef Class "kcca"
ycoef,kcca-method Class "kcca"
ymatrix Class "vm"
ymatrix,gausspr-method Class "gausspr"
ymatrix,kqr-method Class "kqr"
ymatrix,ksvm-method Class "ksvm"
ymatrix,lssvm-method Class "lssvm"
ymatrix,rvm-method Class "rvm"
ymatrix,vm-method Class "vm"
yvar,kcca-method Class "kcca"